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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs200264742 chr6:41172083 TG/T 4.2E-5 500 37.03 44.3 10.97 KM Plot
KIRC rs200779182 chr16:2942993 TATATAC/T 1.6E-5 502 36.12 44.3 3.37 KM Plot
KIRC rs200833200 chr16:2955682 C/CTAGG 1.64E-5 500 37.18 37.82 9.37 KM Plot
KIRC rs201722038 chr4:107884216 T/TCAAAACAAAA 4.15E-11 508 37.73 30.9 5.53 KM Plot
KIRC rs202203393 chr4:123203796 C/CA 2.51E-11 504 36.88 47.83 1.97 KM Plot
KIRC rs2028696 chr4:186310302 A/G 6.16E-7 507 3.53 37.77 37.03 KM Plot
KIRC rs2028697 chr4:186310191 A/G 6.59E-7 502 3.53 37.77 37.18 KM Plot
KIRC rs2028700 chr4:186346152 C/G 5.26E-7 507 3.53 37.77 37.18 KM Plot
KIRC rs2090033 chr2:20372497 C/T 4.2E-5 494 27.92 47.43 33.07 KM Plot
KIRC rs210176 chr6:33483916 A/G 3.12E-5 491 37.77 35.83 6.92 KM Plot
KIRC rs210193 chr6:33481961 C/T 3.49E-6 495 37.5 39.62 3.67 KM Plot
KIRC rs2112799 chr19:56161206 C/T 3.39E-8 500 37.73 35.83 7.4 KM Plot
KIRC rs2125482 chr3:48323133 T/G 0.000114 496 37.9 36.93 19.13 KM Plot
KIRC rs2147789 chr1:111773830 A/T 1.18E-5 509 38.1 37.83 29.07 KM Plot
KIRC rs2171176 chr2:67616697 T/C 2.01E-7 506 37.33 37.77 2.03 KM Plot